【发布时间】:2014-03-05 10:09:58
【问题描述】:
我想从数据中估计一个简单线性函数和一个伽马分布噪声项的参数。 (注意:这是https://stats.stackexchange.com/questions/88676/regression-with-unidirectional-noise 的后续问题,但经过简化且更具体化)。假设我的观察数据生成如下:
import numpy as np
np.random.seed(0)
size = 200
true_intercept = 1
true_slope = 2
# Generate observed data
x_ = np.linspace(0, 1, size)
true_regression_line = true_intercept + true_slope * x_ # y = a + b*x
noise_ = np.random.gamma(shape=1.0, scale=1.0, size=size)
y_ = true_regression_line + noise_
看起来如下:
我尝试使用 pymc 估计这些参数,如下所示:
from pymc import Normal, Gamma, Uniform, Model, MAP
# Define priors
intercept = Normal('intercept', 0, tau=0.1)
slope = Normal('slope', 0, tau=0.1)
alpha = Uniform('alpha', 0, 2)
beta = Uniform('beta', 0, 2)
noise = Gamma('noise', alpha=alpha, beta=beta, size=size)
# Give likelihood > 0 to models where the regression line becomes larger than
# any of the datapoint
y = Normal('y', mu=intercept + slope * x_ + noise, tau=100,
observed=True, value=y_)
# Perform MAP fit of model
model = Model([alpha, beta, intercept, slope, noise])
map_ = MAP(model)
map_.fit()
但是,这给了我与真实值相去甚远的估计:
- 拦截:真:1.000,估计:3.281
- 斜率:真实:2.000,估计:-3.400
我做错了吗?
【问题讨论】:
-
我发现这主要是 MAP.fit() 中使用的优化器的问题。
标签: python regression pymc mcmc