【问题标题】:Xarray rolling construct in multiple dimensionXarray 多维滚动构造
【发布时间】:2020-12-01 11:41:34
【问题描述】:

为多维滚动窗口使用 xarray 滚动构造的最佳方法是什么?这是一个 numpy 示例:

import numpy as np
from numpy.lib.stride_tricks import as_strided

data = np.array(np.arange(6).reshape(2, 3),dtype="float64")


win_size = (
    3  # Size of the window (e.g. 3*3)
)
win_size_half = int(np.floor(win_size / 2))

# pad with nan to get correct window for the edges
data = np.pad(
    data,
    (win_size_half, win_size_half),
    "constant",
    constant_values=(np.nan),
)

sub_shape = (win_size, win_size)
view_shape = tuple(np.subtract(data.shape, sub_shape) + 1) + sub_shape
data_view = as_strided(
    data, view_shape, data.strides * 2
)
data_view = data_view.reshape((-1,) + sub_shape)

#Expected results
>>> data_view
array([[[nan, nan, nan],
        [nan,  0.,  1.],
        [nan,  3.,  4.]],

       [[nan, nan, nan],
        [ 0.,  1.,  2.],
        [ 3.,  4.,  5.]],

       [[nan, nan, nan],
        [ 1.,  2., nan],
        [ 4.,  5., nan]],

       [[nan,  0.,  1.],
        [nan,  3.,  4.],
        [nan, nan, nan]],

       [[ 0.,  1.,  2.],
        [ 3.,  4.,  5.],
        [nan, nan, nan]],

       [[ 1.,  2., nan],
        [ 4.,  5., nan],
        [nan, nan, nan]]])

我想知道如何将 xarray 用于相同目的。例如,使用 xarray 进行与上述相同的操作:

import xarray as xr

da =xr.DataArray(np.array(np.arange(6).reshape(2, 3),dtype="float64"),dims=("a","b"))

# And something like
rolling = da.rolling({"a":win_size,"b":win_size})

# producing same results as in numpy example
rolling.construct("window_dim")

据我了解,xr.rolling 不允许使用多个维度。如果有其他方法可以进行此类操作,请告诉我。

谢谢

【问题讨论】:

    标签: python numpy python-xarray


    【解决方案1】:

    xr.rolling 现在接受多个维度。您必须为 rolling.construct 提供 dict 映射(或基于关键字)。

    您的 numpy 示例采用 windows 中心,它不是 xr.rolling 的默认设置,因此您必须明确提供 center=True

    以下代码给出与您的 numpy 代码相同的结果:

    import xarray as xr
    import numpy as np
    
    da =xr.DataArray(np.array(np.arange(6).reshape(2, 3),dtype="float64"),dims=("a","b"))
    
    rolling = da.rolling({"a":3,"b":3}, center=True)
    
    # producing same results as in numpy example
    da_roll = rolling.construct(a='ka',b='kb')
    da_roll
    Out[2]: 
    <xarray.DataArray (a: 2, b: 3, ka: 3, kb: 3)>
    array([[[[nan, nan, nan],
             [nan,  0.,  1.],
             [nan,  3.,  4.]],
            [[nan, nan, nan],
             [ 0.,  1.,  2.],
             [ 3.,  4.,  5.]],
            [[nan, nan, nan],
             [ 1.,  2., nan],
             [ 4.,  5., nan]]],
           [[[nan,  0.,  1.],
             [nan,  3.,  4.],
             [nan, nan, nan]],
            [[ 0.,  1.,  2.],
             [ 3.,  4.,  5.],
             [nan, nan, nan]],
            [[ 1.,  2., nan],
             [ 4.,  5., nan],
             [nan, nan, nan]]]])
    Dimensions without coordinates: a, b, ka, kb
    

    【讨论】:

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