在 Spark 中获取 StreamChunkId 时失败答案

【问题标题】：Failure while fetching StreamChunkId in Spark在 Spark 中获取 StreamChunkId 时失败
【发布时间】：2019-01-21 10:41:42
【问题描述】：

我正在以下容器中运行我的 spark 作业。应用程序未成功完成，我有以下失败阶段异常：

org.apache.spark.shuffle.FetchFailedException: Failure while fetching StreamChunkId{streamId=1484813259338, chunkIndex=2}: java.io.FileNotFoundException

完整的堆栈跟踪是这样的：

org.apache.spark.shuffle.FetchFailedException: Failure while fetching StreamChunkId{streamId=1484813259338, chunkIndex=2}: java.io.FileNotFoundException: /hadoop/yarn/local/usercache/usrnm/appcache/application_1506332297432_0037/blockmgr-a6cb2380-83af-4802-8134-89f97ea3c37a/0e/shuffle_14_2236_0.index (No such file or directory)
    at java.io.FileInputStream.open0(Native Method)
    at java.io.FileInputStream.open(FileInputStream.java:195)
    at java.io.FileInputStream.<init>(FileInputStream.java:138)
    at org.apache.spark.shuffle.IndexShuffleBlockResolver.getBlockData(IndexShuffleBlockResolver.scala:199)
    at org.apache.spark.storage.BlockManager.getBlockData(BlockManager.scala:351)
    at org.apache.spark.network.netty.NettyBlockRpcServer$$anonfun$1.apply(NettyBlockRpcServer.scala:61)
    at org.apache.spark.network.netty.NettyBlockRpcServer$$anonfun$1.apply(NettyBlockRpcServer.scala:60)
    at scala.collection.Iterator$$anon$11.next(Iterator.scala:409)
    at scala.collection.convert.Wrappers$IteratorWrapper.next(Wrappers.scala:31)
    at org.apache.spark.network.server.OneForOneStreamManager.getChunk(OneForOneStreamManager.java:89)
    at org.apache.spark.network.server.TransportRequestHandler.processFetchRequest(TransportRequestHandler.java:125)
    at org.apache.spark.network.server.TransportRequestHandler.handle(TransportRequestHandler.java:103)
    at org.apache.spark.network.server.TransportChannelHandler.channelRead(TransportChannelHandler.java:118)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:357)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:343)
    at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:336)
    at io.netty.handler.timeout.IdleStateHandler.channelRead(IdleStateHandler.java:287)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:357)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:343)
    at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:336)
    at io.netty.handler.codec.MessageToMessageDecoder.channelRead(MessageToMessageDecoder.java:102)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:357)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:343)
    at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:336)
    at org.apache.spark.network.util.TransportFrameDecoder.channelRead(TransportFrameDecoder.java:85)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:357)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:343)
    at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:336)
    at io.netty.channel.DefaultChannelPipeline$HeadContext.channelRead(DefaultChannelPipeline.java:1294)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:357)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:343)
    at io.netty.channel.DefaultChannelPipeline.fireChannelRead(DefaultChannelPipeline.java:911)
    at io.netty.channel.nio.AbstractNioByteChannel$NioByteUnsafe.read(AbstractNioByteChannel.java:131)
    at io.netty.channel.nio.NioEventLoop.processSelectedKey(NioEventLoop.java:643)
    at io.netty.channel.nio.NioEventLoop.processSelectedKeysOptimized(NioEventLoop.java:566)
    at io.netty.channel.nio.NioEventLoop.processSelectedKeys(NioEventLoop.java:480)
    at io.netty.channel.nio.NioEventLoop.run(NioEventLoop.java:442)
    at io.netty.util.concurrent.SingleThreadEventExecutor$2.run(SingleThreadEventExecutor.java:131)
    at io.netty.util.concurrent.DefaultThreadFactory$DefaultRunnableDecorator.run(DefaultThreadFactory.java:144)
    at java.lang.Thread.run(Thread.java:745)

    at org.apache.spark.storage.ShuffleBlockFetcherIterator.throwFetchFailedException(ShuffleBlockFetcherIterator.scala:442)
    at org.apache.spark.storage.ShuffleBlockFetcherIterator.next(ShuffleBlockFetcherIterator.scala:418)
    at org.apache.spark.storage.ShuffleBlockFetcherIterator.next(ShuffleBlockFetcherIterator.scala:59)
    at scala.collection.Iterator$$anon$12.nextCur(Iterator.scala:434)
    at scala.collection.Iterator$$anon$12.hasNext(Iterator.scala:440)
    at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:408)
    at org.apache.spark.util.CompletionIterator.hasNext(CompletionIterator.scala:32)
    at org.apache.spark.InterruptibleIterator.hasNext(InterruptibleIterator.scala:37)
    at org.apache.spark.util.collection.ExternalAppendOnlyMap.insertAll(ExternalAppendOnlyMap.scala:154)
    at org.apache.spark.Aggregator.combineCombinersByKey(Aggregator.scala:50)
    at org.apache.spark.shuffle.BlockStoreShuffleReader.read(BlockStoreShuffleReader.scala:83)
    at org.apache.spark.rdd.ShuffledRDD.compute(ShuffledRDD.scala:105)
    at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:323)
    at org.apache.spark.rdd.RDD.iterator(RDD.scala:287)
    at org.apache.spark.rdd.CoalescedRDD$$anonfun$compute$1.apply(CoalescedRDD.scala:100)
    at org.apache.spark.rdd.CoalescedRDD$$anonfun$compute$1.apply(CoalescedRDD.scala:99)
    at scala.collection.Iterator$$anon$12.nextCur(Iterator.scala:434)
    at scala.collection.Iterator$$anon$12.hasNext(Iterator.scala:440)
    at org.apache.spark.rdd.PairRDDFunctions$$anonfun$saveAsHadoopDataset$1$$anonfun$12$$anonfun$apply$4.apply$mcV$sp(PairRDDFunctions.scala:1137)
    at org.apache.spark.rdd.PairRDDFunctions$$anonfun$saveAsHadoopDataset$1$$anonfun$12$$anonfun$apply$4.apply(PairRDDFunctions.scala:1137)
    at org.apache.spark.rdd.PairRDDFunctions$$anonfun$saveAsHadoopDataset$1$$anonfun$12$$anonfun$apply$4.apply(PairRDDFunctions.scala:1137)
    at org.apache.spark.util.Utils$.tryWithSafeFinallyAndFailureCallbacks(Utils.scala:1375)
    at org.apache.spark.rdd.PairRDDFunctions$$anonfun$saveAsHadoopDataset$1$$anonfun$12.apply(PairRDDFunctions.scala:1145)
    at org.apache.spark.rdd.PairRDDFunctions$$anonfun$saveAsHadoopDataset$1$$anonfun$12.apply(PairRDDFunctions.scala:1125)
    at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
    at org.apache.spark.scheduler.Task.run(Task.scala:108)
    at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:335)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    at java.lang.Thread.run(Thread.java:745)
Caused by: org.apache.spark.network.client.ChunkFetchFailureException: Failure while fetching StreamChunkId{streamId=1484813259338, chunkIndex=2}: java.io.FileNotFoundException: /hadoop/yarn/local/usercache/usrnm/appcache/application_1506332297432_0037/blockmgr-a6cb2380-83af-4802-8134-89f97ea3c37a/0e/shuffle_14_2236_0.index (No such file or directory)
    at java.io.FileInputStream.open0(Native Method)
    at java.io.FileInputStream.open(FileInputStream.java:195)
    at java.io.FileInputStream.<init>(FileInputStream.java:138)
    at org.apache.spark.shuffle.IndexShuffleBlockResolver.getBlockData(IndexShuffleBlockResolver.scala:199)
    at org.apache.spark.storage.BlockManager.getBlockData(BlockManager.scala:351)
    at org.apache.spark.network.netty.NettyBlockRpcServer$$anonfun$1.apply(NettyBlockRpcServer.scala:61)
    at org.apache.spark.network.netty.NettyBlockRpcServer$$anonfun$1.apply(NettyBlockRpcServer.scala:60)
    at scala.collection.Iterator$$anon$11.next(Iterator.scala:409)
    at scala.collection.convert.Wrappers$IteratorWrapper.next(Wrappers.scala:31)
    at org.apache.spark.network.server.OneForOneStreamManager.getChunk(OneForOneStreamManager.java:89)
    at org.apache.spark.network.server.TransportRequestHandler.processFetchRequest(TransportRequestHandler.java:125)
    at org.apache.spark.network.server.TransportRequestHandler.handle(TransportRequestHandler.java:103)
    at org.apache.spark.network.server.TransportChannelHandler.channelRead(TransportChannelHandler.java:118)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:357)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:343)
    at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:336)
    at io.netty.handler.timeout.IdleStateHandler.channelRead(IdleStateHandler.java:287)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:357)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:343)
    at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:336)
    at io.netty.handler.codec.MessageToMessageDecoder.channelRead(MessageToMessageDecoder.java:102)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:357)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:343)
    at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:336)
    at org.apache.spark.network.util.TransportFrameDecoder.channelRead(TransportFrameDecoder.java:85)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:357)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:343)
    at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:336)
    at io.netty.channel.DefaultChannelPipeline$HeadContext.channelRead(DefaultChannelPipeline.java:1294)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:357)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:343)
    at io.netty.channel.DefaultChannelPipeline.fireChannelRead(DefaultChannelPipeline.java:911)
    at io.netty.channel.nio.AbstractNioByteChannel$NioByteUnsafe.read(AbstractNioByteChannel.java:131)
    at io.netty.channel.nio.NioEventLoop.processSelectedKey(NioEventLoop.java:643)
    at io.netty.channel.nio.NioEventLoop.processSelectedKeysOptimized(NioEventLoop.java:566)
    at io.netty.channel.nio.NioEventLoop.processSelectedKeys(NioEventLoop.java:480)
    at io.netty.channel.nio.NioEventLoop.run(NioEventLoop.java:442)
    at io.netty.util.concurrent.SingleThreadEventExecutor$2.run(SingleThreadEventExecutor.java:131)
    at io.netty.util.concurrent.DefaultThreadFactory$DefaultRunnableDecorator.run(DefaultThreadFactory.java:144)
    at java.lang.Thread.run(Thread.java:745)

    at org.apache.spark.network.client.TransportResponseHandler.handle(TransportResponseHandler.java:182)
    at org.apache.spark.network.server.TransportChannelHandler.channelRead(TransportChannelHandler.java:120)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:357)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:343)
    at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:336)
    at io.netty.handler.timeout.IdleStateHandler.channelRead(IdleStateHandler.java:287)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:357)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:343)
    at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:336)
    at io.netty.handler.codec.MessageToMessageDecoder.channelRead(MessageToMessageDecoder.java:102)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:357)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:343)
    at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:336)
    at org.apache.spark.network.util.TransportFrameDecoder.channelRead(TransportFrameDecoder.java:85)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:357)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:343)
    at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:336)
    at io.netty.channel.DefaultChannelPipeline$HeadContext.channelRead(DefaultChannelPipeline.java:1294)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:357)
    at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:343)
    at io.netty.channel.DefaultChannelPipeline.fireChannelRead(DefaultChannelPipeline.java:911)
    at io.netty.channel.nio.AbstractNioByteChannel$NioByteUnsafe.read(AbstractNioByteChannel.java:131)
    at io.netty.channel.nio.NioEventLoop.processSelectedKey(NioEventLoop.java:643)
    at io.netty.channel.nio.NioEventLoop.processSelectedKeysOptimized(NioEventLoop.java:566)
    at io.netty.channel.nio.NioEventLoop.processSelectedKeys(NioEventLoop.java:480)
    at io.netty.channel.nio.NioEventLoop.run(NioEventLoop.java:442)
    at io.netty.util.concurrent.SingleThreadEventExecutor$2.run(SingleThreadEventExecutor.java:131)
    at io.netty.util.concurrent.DefaultThreadFactory$DefaultRunnableDecorator.run(DefaultThreadFactory.java:144)

这可能是什么问题？

【问题讨论】：

标签： java scala apache-spark

【解决方案1】：

此问题与 Netty 版本不匹配有关，您需要确保 Hadoop 和 Spark 以及 HDFS 使用相同的 Netty 版本运行。

【讨论】：

非常有趣。非常感谢。但是你怎么知道呢？
我如何检查这个版本不匹配？

【解决方案2】：

在 Mesos 上运行时，我有一个类似的驱动程序堆栈跟踪，带有一个外部 shuffle 服务。问题是 shuffle 服务和执行程序对 spark temp 目录的配置不同（请参阅spark.local.dir config）。

附言有关已接受答案的更多详细信息：https://community.hortonworks.com/questions/103267/massive-errors-on-spark-shuffle-and-conneciton-res.html

【讨论】：