【发布时间】:2021-10-31 19:36:18
【问题描述】:
我正在尝试构建一个用于运行 centOS 6 的集群的奇异容器。我需要的一些包在 python 中。问题是pip安装需要glibc-2.14和glibc-2.17。我是根据here和here安装的。
这是我的定义文件:
Bootstrap: docker
From: conda/miniconda3-centos6
%files
conda_env.yml
glibc-2.14
CentOS-Base.repo
glibc-2.17-55.el6.x86_64.rpm
glibc-common-2.17-55.el6.x86_64.rpm
glibc-devel-2.17-55.el6.x86_64.rpm
glibc-headers-2.17-55.el6.x86_64.rpm
glibc-static-2.17-55.el6.x86_64.rpm
glibc-utils-2.17-55.el6.x86_64.rpm
nscd-2.17-55.el6.x86_64.rpm
%post
rm /etc/yum.repos.d/CentOS-Base.repo
mv CentOS-Base.repo /etc/yum.repos.d/
yum install -y wget bzip2 gcc perl bzip2-devel gd
HOME="$PWD"
cd glibc-2.14
mkdir build
cd build
../configure --prefix=/opt/glibc-2.14
make -j8
make install
export LD_LIBRARY_PATH=/opt/glibc-2.14/lib
cd "$HOME"
rpm -Uvh glibc-2.17-55.el6.x86_64.rpm \
glibc-common-2.17-55.el6.x86_64.rpm \
glibc-devel-2.17-55.el6.x86_64.rpm \
glibc-headers-2.17-55.el6.x86_64.rpm \
glibc-static-2.17-55.el6.x86_64.rpm \
glibc-utils-2.17-55.el6.x86_64.rpm \
/usr/local/bin/conda env create -f conda_env.yml
glibc-2.14 安装良好,但安装 glibc-2.17 被证明是困难的。安装失败并出现以下错误:
warning: glibc-2.17-55.el6.x86_64.rpm: Header V3 RSA/SHA1 Signature, key ID 73ec361c: NOKEY
Preparing... ########################################### [100%]
1:glibc-common ########################################### [ 17%]
2:glibc ########################################### [ 33%]
/usr/sbin/glibc_post_upgrade: While trying to execute /usr/sbin/iconvconfig.x86_64 child terminated abnormally
warning: %post(glibc-2.17-55.el6.x86_64) scriptlet failed, exit status 115
error: %pre(glibc-headers-2.17-55.el6.x86_64) scriptlet failed, signal 11
error: install: %pre scriptlet failed (2), skipping glibc-headers-2.17-55.el6
3:glibc-devel ########################################### [ 50%]
error: %post(glibc-devel-2.17-55.el6.x86_64) scriptlet failed, signal 11
4:glibc-static ########################################### [ 67%]
5:glibc-utils ########################################### [ 83%]
FATAL: While performing build: while running engine: exit status 6
像2.14一样安装glibc-2.17会导致调用python时出现segfault。有经验的人可以就可能的解决方案提供一些见解吗?或者,如果有用于 centOS 6 的容器以及更新的 glibc?
提前致谢!
【问题讨论】:
标签: pip centos glibc singularity-container