【发布时间】:2015-07-07 22:53:39
【问题描述】:
我在 Canopy 中使用 python 2.7,我试图通过最小化数据和模型预测之间的均方误差来拟合模型的 6 个参数。我正在使用 COBYLA,因为我需要参数值的界限,而且我没有渐变。
目前,我有:
import numpy as np
import scipy.optimize as opt
def cost_func(pars,y,x):
y_hat = model_output(pars,x)
mse = np.mean((y-y_hat)**2)
return mse
def make_constraints(par_min,par_max):
cons = []
for (i,(a,b)) in enumerate(zip(par_min,par_max)):
lower = lambda x: x[i] - a
upper = lambda x: b - x[i]
cons = cons + [lower] + [upper]
return cons
def estimate_parameters(par_min, par_max,par_init,x,y):
cons = make_constraints(par_min,par_max)
opt_pars = opt.fmin_cobyla(cost_func,pars,cons,args=([y,x]))
return opt_pars
但是我得到了错误:
---------------------------------------------------------------------------
TypeError Traceback (most recent call last)
<ipython-input-63-9e84e10303e1> in <module>()
----> 1 opt_pars = estimate_parameters(par_min,par_max,par_init,x,y)
<ipython-input-61-f38615d82ee5> in estimate_parameters(par_min,par_max,par_init,x,y)
9 cons = make_constraints(par_min,par_max)
10
---> 11 opt_pars = opt.fmin_cobyla(cost_func,par_init,cons,args=([y,x]))
12 return opt_pars
/home/luke/Enthought/Canopy_64bit/User/lib/python2.7/site-packages/scipy/optimize/cobyla.pyc in fmin_cobyla(func, x0, cons, args, consargs, rhobeg, rhoend, iprint, maxfun, disp, catol)
169
170 sol = _minimize_cobyla(func, x0, args, constraints=con,
--> 171 **opts)
172 if iprint > 0 and not sol['success']:
173 print("COBYLA failed to find a solution: %s" % (sol.message,))
/home/luke/Enthought/Canopy_64bit/User/lib/python2.7/site-packages/scipy/optimize/cobyla.pyc in _minimize_cobyla(fun, x0, args, constraints, rhobeg, tol, iprint, maxiter, disp, catol, **unknown_options)
244 xopt, info = _cobyla.minimize(calcfc, m=m, x=np.copy(x0), rhobeg=rhobeg,
245 rhoend=rhoend, iprint=iprint, maxfun=maxfun,
--> 246 dinfo=info)
247
248 if info[3] > catol:
/home/luke/Enthought/Canopy_64bit/User/lib/python2.7/site-packages/scipy/optimize/cobyla.pyc in calcfc(x, con)
238 f = fun(x, *args)
239 for k, c in enumerate(constraints):
--> 240 con[k] = c['fun'](x, *c['args'])
241 return f
242
TypeError: <lambda>() takes exactly 1 argument (3 given)
这个错误对我来说并不完全清楚,但我的理解是 3 个参数正在传递给我的约束函数。但是,我无法弄清楚这 3 个参数的来源。
我已经查看了有关此问题的其他 stackoverflow 问题,并从中获取了我能做到的,但我仍然遇到这个问题
Specifying constraints for fmin_cobyla in scipy
Python SciPy: optimization issue fmin_cobyla : one constraint is not respected
Python: how to create many constraints for fmin_cobyla optimization using lambda functions
【问题讨论】:
标签: python scipy constraints