【发布时间】:2020-01-21 00:11:54
【问题描述】:
这是我的数据(以 dput 格式):
structure(list(Biological.Group = structure(1:15, .Label = c("A",
"C", "E", "D", "F", "G", "W", "R", "T", "Y", "V", "B", "N", "M",
"L"), class = "factor"), Group = c(NA, NA, 1L, 1L, 1L, 1L, 2L,
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L), Relative.Normalized.Expression....Cq. = c(5L,
7L, 3L, 5L, 6L, 8L, 9L, 1L, 4L, 5L, 7L, 4L, 2L, 7L, 8L), SE = c(0.171499719,
0.089692493, 0.153777208, 0.188012958, 0.153776128, 0.192917199,
0.224766056, 0.231338325, 0.121716906, 0.094763028, 0.09635363,
0.069986333, 0.113681329, 0.094614957, 0.391182473)), row.names = c(NA,
-15L), class = "data.frame")
这是我的图表的代码:
library(ggplot2)
colours <- c("A"="darkolivegreen4","C"="darkolivegreen2","E"="darkseagreen4","D"="darkseagreen3", "F"="gold3","G"="gold", "W"="goldenrod2","R"="yellow2","T"="mediumpurple","Y"="thistle1", "V"="turquoise","B"="pink3", "N"="plum4", "M"="tomato3", "L"="orange1")
df$Biological.Group <- as.character(df$Biological.Group)
df$Biological.Group <- factor(df$Biological.Group,
levels=unique(df$Biological.Group))
plot = ggplot(df, aes(Biological.Group,Relative.Normalized.Expression....Cq.,fill=factor(Biological.Group)))+ scale_fill_manual(values = colours) + xlab("Condition") +ylab("Relative Normalized Expression (∆∆Cq)")+geom_bar(stat="identity")
plot + geom_errorbar(aes(ymin=Relative.Normalized.Expression....Cq.-SE,ymax=Relative.Normalized.Expression....Cq.+SE),width=0.5)+geom_boxplot() + theme(axis.text.x = element_text(angle = 60, hjust = 1)) + theme(legend.position="none") +ggtitle("Mrdf-1")+theme(plot.title = element_text(size=12, face="italic",hjust=0.5))
ggsave("dfGraph.png",height=5.64,width=5.64)
我想将“组”列数据(第二列数据)作为 x 轴中的辅助标签,如下所示:
如果可能的话,我还想让组之间的空间更大(意思是“A”和“C”、“C”和“E”、“G”和“W”之间)
【问题讨论】: