【问题标题】:Trigger code when a file is missing in targets package当目标包中缺少文件时触发代码
【发布时间】:2021-03-05 11:15:26
【问题描述】:

考虑以下代码,我的targets 管道中有两个文件。

options(crayon.enabled = FALSE, tidyverse.quiet = TRUE)
library(targets)
library(tidyverse)
write_csv(tibble(x1 = 1, x2 = 1), "a.csv")
write_csv(tibble(x1 = 1, x2 = 1), "b.csv")
tar_script({
  options(crayon.enabled = FALSE, tidyverse.quiet = TRUE)
  library(readr)
  list(
    tarchetypes::tar_files(paths, c("a.csv", "b.csv")),
    tar_target(data, read_csv(paths, col_types = "dd"), pattern = map(paths))
  )
})
tar_make()
#> ● run target paths_files
#> ● run branch paths_5c47d23d
#> ● run branch paths_63f6955e
#> ● run branch data_ecdaefee
#> ● run branch data_34ea7b1c
#> ● end pipeline

这适用于下游效果,即如果我修改 b.csv,则下游的相应分支 (data) 会再次运行。但是我将如何创建一个向上游传播的目标(即,如果缺少 b.csv,那么我希望运行一个规则来重新创建它)。

谢谢,

【问题讨论】:

    标签: r targets-r-package


    【解决方案1】:

    在这种情况下,管道中的目标应该创建文件。草图:

    # _targets.R file:
    library(readr)
    library(targets)
    library(tibble)
    options(crayon.enabled = FALSE, tidyverse.quiet = TRUE)
    
    helper <- function(path) {
      write_csv(tibble(x1 = 1, x2 = 1), path) # 1. Write the file.
      path                                    # 2. Return the path.
    }
    
    list(
      tar_target(paths, c("a.csv", "b.csv")),
      tar_target(files, helper(paths), pattern = map(paths), format = "file"),
      tar_target(data, read_csv(paths, col_types = cols()), pattern = map(files))
    )
    

    【讨论】:

    • 完美!谢谢。
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