【问题标题】:PySpark 3 - UDF to remove items from list columnPySpark 3 - UDF 从列表列中删除项目
【发布时间】:2021-08-16 17:48:33
【问题描述】:

我正在一个数据框中创建一个列,该列是一个由 4 个结构组成的数组。它们中的任何一个都可以为空,但由于我需要在这个数组中有固定数量的项目,所以我需要在事后清除空项目。尝试使用 UDF 删除空项目时出现错误。这是一个例子:

创建数据框,注意“a”值之一是无

spark = SparkSession.builder.getOrCreate()
df = spark.createDataFrame([{"a": "x", "b": "y", "c": "3"}, {"a": "1", "b": "9", "c": "G"}, {"a": None, "b": "Z", "c": "8"}])

UDF 删除空项

@udf
def remove_null_items(s):
    if s is not None:
        return list(filter(None, s))
    else:
        return None

使用结构数组创建列

df = df.withColumn("name_list", func.array(
    func.struct(func.col("a").alias("name")),
    func.struct(func.col("b").alias("name")),
    func.struct(func.col("c").alias("name")),
).alias("names"))

然后当我运行这个命令时:

df.select(remove_null_items('name_list')).show()

我收到此错误:

Py4JJavaError: An error occurred while calling o241.showString.
: org.apache.spark.SparkException: Job aborted due to stage failure: Task 10 in stage 26.0 failed 1 times, most recent failure: Lost task 10.0 in stage 26.0 (TID 303, etl-01.iwave, executor driver): net.razorvine.pickle.PickleException: expected zero arguments for construction of ClassDict (for pyspark.sql.types._create_row)
    at net.razorvine.pickle.objects.ClassDictConstructor.construct(ClassDictConstructor.java:23)
    at net.razorvine.pickle.Unpickler.load_reduce(Unpickler.java:773)
    at net.razorvine.pickle.Unpickler.dispatch(Unpickler.java:213)
    at net.razorvine.pickle.Unpickler.load(Unpickler.java:123)
    at net.razorvine.pickle.Unpickler.loads(Unpickler.java:136)
    at org.apache.spark.sql.execution.python.BatchEvalPythonExec.$anonfun$evaluate$6(BatchEvalPythonExec.scala:83)
    at scala.collection.Iterator$$anon$11.nextCur(Iterator.scala:484)
    at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:490)
    at scala.collection.Iterator$$anon$10.hasNext(Iterator.scala:458)
    at scala.collection.Iterator$$anon$10.hasNext(Iterator.scala:458)
    at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage2.processNext(Unknown Source)
    at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
    at org.apache.spark.sql.execution.WholeStageCodegenExec$$anon$1.hasNext(WholeStageCodegenExec.scala:729)
    at org.apache.spark.sql.execution.SparkPlan.$anonfun$getByteArrayRdd$1(SparkPlan.scala:340)
    at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2(RDD.scala:872)
    at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2$adapted(RDD.scala:872)
    at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
    at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:349)
    at org.apache.spark.rdd.RDD.iterator(RDD.scala:313)
    at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
    at org.apache.spark.scheduler.Task.run(Task.scala:127)
    at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:446)
    at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1377)
    at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:449)
    at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
    at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
    at java.base/java.lang.Thread.run(Thread.java:829)

Driver stacktrace:
    at org.apache.spark.scheduler.DAGScheduler.failJobAndIndependentStages(DAGScheduler.scala:2059)
    at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2(DAGScheduler.scala:2008)
    at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2$adapted(DAGScheduler.scala:2007)
    at scala.collection.mutable.ResizableArray.foreach(ResizableArray.scala:62)
    at scala.collection.mutable.ResizableArray.foreach$(ResizableArray.scala:55)
    at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:49)
    at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:2007)
    at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1(DAGScheduler.scala:973)
    at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1$adapted(DAGScheduler.scala:973)
    at scala.Option.foreach(Option.scala:407)
    at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:973)
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:2239)
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2188)
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2177)
    at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:49)
    at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:775)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:2099)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:2120)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:2139)
    at org.apache.spark.sql.execution.SparkPlan.executeTake(SparkPlan.scala:467)
    at org.apache.spark.sql.execution.SparkPlan.executeTake(SparkPlan.scala:420)
    at org.apache.spark.sql.execution.CollectLimitExec.executeCollect(limit.scala:47)
    at org.apache.spark.sql.Dataset.collectFromPlan(Dataset.scala:3627)
    at org.apache.spark.sql.Dataset.$anonfun$head$1(Dataset.scala:2697)
    at org.apache.spark.sql.Dataset.$anonfun$withAction$1(Dataset.scala:3618)
    at org.apache.spark.sql.execution.SQLExecution$.$anonfun$withNewExecutionId$5(SQLExecution.scala:100)
    at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:160)
    at org.apache.spark.sql.execution.SQLExecution$.$anonfun$withNewExecutionId$1(SQLExecution.scala:87)
    at org.apache.spark.sql.SparkSession.withActive(SparkSession.scala:764)
    at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:64)
    at org.apache.spark.sql.Dataset.withAction(Dataset.scala:3616)
    at org.apache.spark.sql.Dataset.head(Dataset.scala:2697)
    at org.apache.spark.sql.Dataset.take(Dataset.scala:2904)
    at org.apache.spark.sql.Dataset.getRows(Dataset.scala:300)
    at org.apache.spark.sql.Dataset.showString(Dataset.scala:337)
    at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.base/java.lang.reflect.Method.invoke(Method.java:566)
    at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
    at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
    at py4j.Gateway.invoke(Gateway.java:282)
    at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
    at py4j.commands.CallCommand.execute(CallCommand.java:79)
    at py4j.GatewayConnection.run(GatewayConnection.java:238)
    at java.base/java.lang.Thread.run(Thread.java:829)
Caused by: net.razorvine.pickle.PickleException: expected zero arguments for construction of ClassDict (for pyspark.sql.types._create_row)
    at net.razorvine.pickle.objects.ClassDictConstructor.construct(ClassDictConstructor.java:23)
    at net.razorvine.pickle.Unpickler.load_reduce(Unpickler.java:773)
    at net.razorvine.pickle.Unpickler.dispatch(Unpickler.java:213)
    at net.razorvine.pickle.Unpickler.load(Unpickler.java:123)
    at net.razorvine.pickle.Unpickler.loads(Unpickler.java:136)
    at org.apache.spark.sql.execution.python.BatchEvalPythonExec.$anonfun$evaluate$6(BatchEvalPythonExec.scala:83)
    at scala.collection.Iterator$$anon$11.nextCur(Iterator.scala:484)
    at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:490)
    at scala.collection.Iterator$$anon$10.hasNext(Iterator.scala:458)
    at scala.collection.Iterator$$anon$10.hasNext(Iterator.scala:458)
    at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage2.processNext(Unknown Source)
    at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
    at org.apache.spark.sql.execution.WholeStageCodegenExec$$anon$1.hasNext(WholeStageCodegenExec.scala:729)
    at org.apache.spark.sql.execution.SparkPlan.$anonfun$getByteArrayRdd$1(SparkPlan.scala:340)
    at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2(RDD.scala:872)
    at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2$adapted(RDD.scala:872)
    at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
    at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:349)
    at org.apache.spark.rdd.RDD.iterator(RDD.scala:313)
    at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
    at org.apache.spark.scheduler.Task.run(Task.scala:127)
    at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:446)
    at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1377)
    at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:449)
    at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
    at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
    ... 1 more

有什么我应该做的不同的事情吗?

【问题讨论】:

    标签: python apache-spark pyspark user-defined-functions


    【解决方案1】:

    不需要UDF。可以使用 Spark SQL filter

    df.select(F.expr('filter(name_list, x -> x.name is not null) as newcol')).show()
    +---------------+
    |         newcol|
    +---------------+
    |[[x], [y], [3]]|
    |[[1], [9], [G]]|
    |     [[Z], [8]]|
    +---------------+
    

    如果你真的需要一个UDF,你可以使用:

    @func.udf('array<struct<name:string>>')
    def remove_null_items(s):
        if s is not None:
            return list(filter(lambda s: s['name'] is not None, s))
        else:
            return None
    
    df.select(remove_null_items('name_list')).show()
    +----------------------------+
    |remove_null_items(name_list)|
    +----------------------------+
    |             [[x], [y], [3]]|
    |             [[1], [9], [G]]|
    |                  [[Z], [8]]|
    +----------------------------+
    

    【讨论】:

    • 我之前没用过F.expr()函数,很方便!我认为使用 UDF 时的问题是我没有指定返回类型。主要原因是我的实际代码具有更复杂的结构,所以我没有开始创建类型。这非常有帮助,不过谢谢!
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