【发布时间】:2020-12-07 19:44:16
【问题描述】:
尽管 Dataflow 将目标工人数设置为 1000,但我的 Dataflow 作业(作业 ID:2020-08-18_07_55_15-14428306650890914471)并未超过 1 个工人。
该作业被配置为查询 Google Patents BigQuery 数据集,使用 ParDo 自定义函数和转换器(拥抱脸)库标记文本,序列化结果,并将所有内容写入一个巨大的 parquet 文件。
我曾假设(在昨天运行该作业后,它映射了一个函数而不是使用 beam.DoFn 类)问题是一些非并行化对象消除了缩放;因此,将标记化过程重构为一个类。
这是脚本,它使用以下命令从命令行运行:
python bq_to_parquet_pipeline_w_class.py --extra_package transformers-3.0.2.tar.gz
脚本:
import os
import re
import argparse
import google.auth
import apache_beam as beam
from apache_beam.options import pipeline_options
from apache_beam.options.pipeline_options import GoogleCloudOptions
from apache_beam.options.pipeline_options import PipelineOptions
from apache_beam.options.pipeline_options import SetupOptions
from apache_beam.runners import DataflowRunner
from apache_beam.io.gcp.internal.clients import bigquery
import pyarrow as pa
import pickle
from transformers import AutoTokenizer
print('Defining TokDoFn')
class TokDoFn(beam.DoFn):
def __init__(self, tok_version, block_size=200):
self.tok = AutoTokenizer.from_pretrained(tok_version)
self.block_size = block_size
def process(self, x):
txt = x['abs_text'] + ' ' + x['desc_text'] + ' ' + x['claims_text']
enc = self.tok.encode(txt)
for idx, token in enumerate(enc):
chunk = enc[idx:idx + self.block_size]
serialized = pickle.dumps(chunk)
yield serialized
def run(argv=None, save_main_session=True):
query_big = '''
with data as (
SELECT
(select text from unnest(abstract_localized) limit 1) abs_text,
(select text from unnest(description_localized) limit 1) desc_text,
(select text from unnest(claims_localized) limit 1) claims_text,
publication_date,
filing_date,
grant_date,
application_kind,
ipc
FROM `patents-public-data.patents.publications`
)
select *
FROM data
WHERE
abs_text is not null
AND desc_text is not null
AND claims_text is not null
AND ipc is not null
'''
query_sample = '''
SELECT *
FROM `client_name.patent_data.patent_samples`
LIMIT 2;
'''
print('Start Run()')
parser = argparse.ArgumentParser()
known_args, pipeline_args = parser.parse_known_args(argv)
'''
Configure Options
'''
# Setting up the Apache Beam pipeline options.
# We use the save_main_session option because one or more DoFn's in this
# workflow rely on global context (e.g., a module imported at module level).
options = PipelineOptions(pipeline_args)
options.view_as(SetupOptions).save_main_session = save_main_session
# Sets the project to the default project in your current Google Cloud environment.
_, options.view_as(GoogleCloudOptions).project = google.auth.default()
# Sets the Google Cloud Region in which Cloud Dataflow runs.
options.view_as(GoogleCloudOptions).region = 'us-central1'
# IMPORTANT! Adjust the following to choose a Cloud Storage location.
dataflow_gcs_location = 'gs://client_name/dataset_cleaned_pq_classTok'
# Dataflow Staging Location. This location is used to stage the Dataflow Pipeline and SDK binary.
options.view_as(GoogleCloudOptions).staging_location = f'{dataflow_gcs_location}/staging'
# Dataflow Temp Location. This location is used to store temporary files or intermediate results before finally outputting to the sink.
options.view_as(GoogleCloudOptions).temp_location = f'{dataflow_gcs_location}/temp'
# The directory to store the output files of the job.
output_gcs_location = f'{dataflow_gcs_location}/output'
print('Options configured per GCP Notebook Examples')
print('Configuring BQ Table Schema for Beam')
#Write Schema (to PQ):
schema = pa.schema([
('block', pa.binary())
])
print('Starting pipeline...')
with beam.Pipeline(runner=DataflowRunner(), options=options) as p:
res = (p
| 'QueryTable' >> beam.io.Read(beam.io.BigQuerySource(query=query_big, use_standard_sql=True))
| beam.ParDo(TokDoFn(tok_version='gpt2', block_size=200))
| beam.Map(lambda x: {'block': x})
| beam.io.WriteToParquet(os.path.join(output_gcs_location, f'pq_out'),
schema,
record_batch_size=1000)
)
print('Pipeline built. Running...')
if __name__ == '__main__':
import logging
logging.getLogger().setLevel(logging.INFO)
logging.getLogger("transformers.tokenization_utils_base").setLevel(logging.ERROR)
run()
【问题讨论】:
-
您的配额似乎不足以启动 1000 台机器。
-
请问您在哪里看到的?
-
请注意,目标工人设置为 1000,而实际工人的数量保持在 1。我没有收到通知我试图超过任何配额,所以我不太清楚确定在哪里查看:增加我的配额。
-
请检查 Compute Engine CPU 的 /iam-admin/quotas/details 以查看您是否有足够的配额来启动 1000 个工作器。目标工作人员的数量表示 Dataflow 需要多少台机器,并且不受您的配额限制。
-
@PeterKim 我的 us-central-1 Compute Engine API CPU 配额是 24,页面显示我目前使用的是 1。可能是因为 Dataflow 正试图立即扩展到 1000 ,它没有注意到它可以扩展到 24 并停在那里?似乎有人已经发现了这个错误。
标签: python google-cloud-platform google-compute-engine google-cloud-dataflow apache-beam