【发布时间】:2018-05-18 00:56:29
【问题描述】:
这可能是一个新手问题。当完全相同的代码在 linux 上运行时,我无法对简单的 helloworld.pyx 教程脚本进行 cythonize:
print("hello world")
这里是 setup.py 脚本:
from distutils.core import setup
from Cython.Build import cythonize
setup(ext_modules = cythonize('helloworld.pyx'))
但我在运行 python setup.py build_ext --inplace 后得到了这个:
running build_ext
building 'helloworld' extension
creating build
creating build/temp.macosx-10.7-x86_64-3.6
gcc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/Users/haotian/anaconda3/include -arch x86_64 -I/Users/haotian/anaconda3/include -arch x86_64 -I/Users/haotian/anaconda3/include/python3.6m -c helloworld.c -o build/temp.macosx-10.7-x86_64-3.6/helloworld.o
In file included from helloworld.c:16:
In file included from /Users/haotian/anaconda3/include/python3.6m/Python.h:34:
In file included from /usr/include/stdlib.h:65:
In file included from /usr/include/sys/wait.h:110:
/usr/include/sys/resource.h:196:2: error: unknown type name 'uint8_t'
uint8_t ri_uuid[16];
^
/usr/include/sys/resource.h:197:2: error: unknown type name 'uint64_t'
uint64_t ri_user_time;
^
/usr/include/sys/resource.h:198:2: error: unknown type name 'uint64_t'
uint64_t ri_system_time;
^
/usr/include/sys/resource.h:199:2: error: unknown type name 'uint64_t'
uint64_t ri_pkg_idle_wkups;
^
/usr/include/sys/resource.h:200:2: error: unknown type name 'uint64_t'
uint64_t ri_interrupt_wkups;
^
/usr/include/sys/resource.h:201:2: error: unknown type name 'uint64_t'
uint64_t ri_pageins;
^
/usr/include/sys/resource.h:202:2: error: unknown type name 'uint64_t'
uint64_t ri_wired_size;
^
/usr/include/sys/resource.h:203:2: error: unknown type name 'uint64_t'
uint64_t ri_resident_size;
^
/usr/include/sys/resource.h:204:2: error: unknown type name 'uint64_t'
uint64_t ri_phys_footprint;
^
/usr/include/sys/resource.h:205:2: error: unknown type name 'uint64_t'
uint64_t ri_proc_start_abstime;
^
/usr/include/sys/resource.h:206:2: error: unknown type name 'uint64_t'
uint64_t ri_proc_exit_abstime;
^
/usr/include/sys/resource.h:210:2: error: unknown type name 'uint8_t'
uint8_t ri_uuid[16];
^
/usr/include/sys/resource.h:211:2: error: unknown type name 'uint64_t'
uint64_t ri_user_time;
^
/usr/include/sys/resource.h:212:2: error: unknown type name 'uint64_t'
uint64_t ri_system_time;
^
/usr/include/sys/resource.h:213:2: error: unknown type name 'uint64_t'
uint64_t ri_pkg_idle_wkups;
^
/usr/include/sys/resource.h:214:2: error: unknown type name 'uint64_t'
uint64_t ri_interrupt_wkups;
^
/usr/include/sys/resource.h:215:2: error: unknown type name 'uint64_t'
uint64_t ri_pageins;
^
/usr/include/sys/resource.h:216:2: error: unknown type name 'uint64_t'
uint64_t ri_wired_size;
^
/usr/include/sys/resource.h:217:2: error: unknown type name 'uint64_t'
uint64_t ri_resident_size;
^
fatal error: too many errors emitted, stopping now [-ferror-limit=]
20 errors generated.
error: command 'gcc' failed with exit status 1
我使用的是 MacOS 10.13.1、python 3.6.3、Cython 0.27.3 和 clang-900.0.38。
显然包含 stdint.h 存在问题,我应该如何在 Cython 中进行呢?
编辑: 我的 gcc 在 /usr/bin/gcc
gcc --version
显示:
Configured with: --prefix=/Applications/Xcode.app/Contents/Developer/usr --with-gxx-include-dir=/usr/include/c++/4.2.1
Apple LLVM version 9.0.0 (clang-900.0.38)
Target: x86_64-apple-darwin17.2.0
Thread model: posix
InstalledDir: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin
【问题讨论】:
-
你确定你使用的是clang而不是gcc吗?你的gcc是哪个版本的,如果日志可信的话用哪个?
-
helloworld.c 可能不包含
#include <stdint.h>。或者,你被困在“垃圾模式”,又名 gnu90。将-std=c99或-std=c11传递给gcc 编译器。 -
我修改了版本号@ead
-
看起来clang“假装”是gcc并使用相当老的gcc-headers(4.2.1)。您应该直接使用 clang(将 CC 环境变量设置为 clang)或安装更新的 gcc 版本
-
设置 CC 似乎不起作用,我尝试手动运行 gcc-7:
/usr/local/bin/gcc-7 -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/Users/haotian/anaconda3/include -arch x86_64 -I/Users/haotian/anaconda3/include -arch x86_64 -I/Users/haotian/anaconda3/include/python3.6m -c helloworld.c -o build/temp.macosx-10.7-x86_64-3.6/helloworld.o这也给了我同样的错误