R draw.triple.venn() 缩放圆圈答案

【问题标题】：R draw.triple.venn() scale circlesR draw.triple.venn() 缩放圆圈
【发布时间】：2017-04-09 14:47:58
【问题描述】：

我在 R 上使用 draw.triple.venn() 缩放维恩图时遇到了一些麻烦。我想这是一件小事，但我找不到答案。有人知道如何缩放圆圈吗？

这里是我使用的命令行：

draw.triple.venn(area1 = nrow(sp1), area2 = nrow(sp3), area3 = nrow(sp4),
                 n12 =  nrow(subset(pval_test3, pval_test3$PValue_sp1<0.01 & pval_test3$PValue_sp3<0.01)), 
                 n23 =  nrow(subset(pval_test3, pval_test3$PValue_sp3<0.01 & pval_test3$PValue_sp4<0.01)), 
                 n13 =  nrow(subset(pval_test3, pval_test3$PValue_sp1<0.01 & pval_test3$PValue_sp4<0.01)), 
                 n123 = nrow(subset(pval_test3, pval_test3$PValue_sp1<0.01 & pval_test3$PValue_sp3<0.01 & pval_test3$PValue_sp4<0.01)),
                 category = c("Sp1_CAM", "Sp3_CAM", "Sp4_CAM"),
                 cex=3,
                 lty = 1,
                 lwd = 0.5,
                 fill = c("darkgreen", "orange", "mediumorchid"),
                 scaled = TRUE)

附上数据详情：

sp1
            PValue_sp1   PValue_sp3   PValue_sp4
Aco007803 0.0000761000 4.297191e-02 4.030000e-05
Aco018093 0.0000016600 1.027826e-02 3.795107e-03
Aco013938 0.0000006830 6.530000e-13 4.310000e-09
Aco007734 0.0000153000 3.495795e-01 1.330000e-06
Aco004996 0.0063814087 5.454905e-01 2.514318e-03
Aco009967 0.0008453804 2.864100e-04 4.805802e-03

sp3
            PValue_sp1   PValue_sp3   PValue_sp4
Aco010025 0.1039756542 1.180000e-06 6.838790e-02
Aco016429 0.0482512443 1.069428e-03 6.083664e-03
Aco010095 0.1100983022 1.980850e-04 3.607129e-02
Aco013938 0.0000006830 6.530000e-13 4.310000e-09
Aco013935 0.2884582383 6.018554e-04 4.455669e-01
Aco009967 0.0008453804 2.864100e-04 4.805802e-03
Aco024818 0.2889005277 6.862406e-04 1.891679e-02

sp4
            PValue_sp1   PValue_sp3   PValue_sp4
Aco007803 0.0000761000 4.297191e-02 4.030000e-05
Aco018093 0.0000016600 1.027826e-02 3.795107e-03
Aco016429 0.0482512443 1.069428e-03 6.083664e-03
Aco013938 0.0000006830 6.530000e-13 4.310000e-09
Aco007734 0.0000153000 3.495795e-01 1.330000e-06
Aco002885 0.5065663636 9.802629e-01 5.633086e-03
Aco004996 0.0063814087 5.454905e-01 2.514318e-03
Aco009967 0.0008453804 2.864100e-04 4.805802e-03
Aco005989 0.1829716906 1.982196e-01 5.610000e-05
Aco007622 0.6341884350 1.010647e-01 6.367963e-04
Aco014488 0.4193623564 4.040470e-02 2.474636e-03

n12
            PValue_sp1 PValue_sp3   PValue_sp4
Aco013938 0.0000006830 6.5300e-13 4.310000e-09
Aco009967 0.0008453804 2.8641e-04 4.805802e-03

n23
            PValue_sp1   PValue_sp3   PValue_sp4
Aco016429 0.0482512443 1.069428e-03 6.083664e-03
Aco013938 0.0000006830 6.530000e-13 4.310000e-09
Aco009967 0.0008453804 2.864100e-04 4.805802e-03

n13
            PValue_sp1   PValue_sp3   PValue_sp4
Aco007803 0.0000761000 4.297191e-02 4.030000e-05
Aco018093 0.0000016600 1.027826e-02 3.795107e-03
Aco013938 0.0000006830 6.530000e-13 4.310000e-09
Aco007734 0.0000153000 3.495795e-01 1.330000e-06
Aco004996 0.0063814087 5.454905e-01 2.514318e-03
Aco009967 0.0008453804 2.864100e-04 4.805802e-03

n123
            PValue_sp1 PValue_sp3   PValue_sp4
Aco013938 0.0000006830 6.5300e-13 4.310000e-09
Aco009967 0.0008453804 2.8641e-04 4.805802e-03`enter code here`

然后生成的图：

enter image description here

但我想以自动方式为许多数据制作以下显示（此处为“inkscaped”，手工制作）：

enter image description here

有谁知道如何生成缩放图像？

【问题讨论】：

标签： r venn-diagram

【解决方案1】：

您只需将scaled 更改为FALSE 即可获得所需的结果。

【讨论】：