无法在 Mac OS X 10.9 上安装 rpy2

【问题标题】：Unable to install rpy2 on Mac OS X 10.9无法在 Mac OS X 10.9 上安装 rpy2
【发布时间】：2014-04-29 10:24:07
【问题描述】：

我一直在尝试在 Mac OS X 10.9 上安装 rpy2，但我一直无法这样做。我认为 R 共享库存在问题，但我读到 R 安装时默认使用共享库选项。任何帮助将不胜感激！

这是日志：

Downloading from URL https://pypi.python.org/packages/source/r/rpy2/rpy2-2.3.9.tar.gz#md5=86851a56f637e7b87709eb2b91dc5075 (from https://pypi.python.org/simple/rpy2/)
Running setup.py (path:/private/tmp/pip_build_root/rpy2/setup.py) egg_info for package rpy2
  running egg_info
  creating pip-egg-info/rpy2.egg-info
  writing dependency_links to pip-egg-info/rpy2.egg-info/dependency_links.txt
  writing pip-egg-info/rpy2.egg-info/PKG-INFO
  writing top-level names to pip-egg-info/rpy2.egg-info/top_level.txt
  writing manifest file 'pip-egg-info/rpy2.egg-info/SOURCES.txt'
  warning: manifest_maker: standard file '-c' not found

  "/opt/local/Library/Frameworks/R.framework/Resources/bin/R" CMD config --ldflags
  "/opt/local/Library/Frameworks/R.framework/Resources/bin/R" CMD config --cppflags
  "/opt/local/Library/Frameworks/R.framework/Resources/bin/R" CMD config LAPACK_LIBS

  returned an empty string.

  "/opt/local/Library/Frameworks/R.framework/Resources/bin/R" CMD config BLAS_LIBS

  returned an empty string.

  Configuration for R as a library:
    include_dirs: ('/opt/local/Library/Frameworks/R.framework/Resources/include',)
    libraries: ()
    library_dirs: ('/opt/local/Library/Frameworks/R.framework/Resources/lib',)
    extra_link_args: ('-F/opt/local/Library/Frameworks/R.framework/..', '-framework R')
   # OSX-specific (included in extra_link_args)
    framework_dirs: ('-F/opt/local/Library/Frameworks/R.framework/..',)
    frameworks: ('-framework R',)
  reading manifest file 'pip-egg-info/rpy2.egg-info/SOURCES.txt'
  reading manifest template 'MANIFEST.in'
  warning: no previously-included files matching '*patch*' found anywhere in distribution
  warning: no previously-included files matching '*diff*' found anywhere in distribution
  warning: no previously-included files matching '.hg' found anywhere in distribution
  no previously-included directories found matching 'dist'
  writing manifest file 'pip-egg-info/rpy2.egg-info/SOURCES.txt'
Source in /private/tmp/pip_build_root/rpy2 has version 2.3.9, which satisfies requirement rpy2
Installing collected packages: rpy2
  Running setup.py install for rpy2
    Running command /usr/bin/python -c "import setuptools, tokenize;__file__='/private/tmp/pip_build_root/rpy2/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /tmp/pip-E3rnYf-record/install-record.txt --single-version-externally-managed --compile
  running install
  running build
  running build_py
  creating build
  creating build/lib.macosx-10.9-intel-2.7
  creating build/lib.macosx-10.9-intel-2.7/rpy2
  copying ./rpy/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2
  copying ./rpy/rpy_classic.py -> build/lib.macosx-10.9-intel-2.7/rpy2
  copying ./rpy/tests.py -> build/lib.macosx-10.9-intel-2.7/rpy2
  copying ./rpy/tests_rpy_classic.py -> build/lib.macosx-10.9-intel-2.7/rpy2
  creating build/lib.macosx-10.9-intel-2.7/rpy2/rlike
  copying ./rpy/rlike/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rlike
  copying ./rpy/rlike/container.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rlike
  copying ./rpy/rlike/functional.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rlike
  copying ./rpy/rlike/indexing.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rlike
  creating build/lib.macosx-10.9-intel-2.7/rpy2/rlike/tests
  copying ./rpy/rlike/tests/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rlike/tests
  copying ./rpy/rlike/tests/test_container.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rlike/tests
  copying ./rpy/rlike/tests/test_functional.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rlike/tests
  copying ./rpy/rlike/tests/test_indexing.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rlike/tests
  creating build/lib.macosx-10.9-intel-2.7/rpy2/rinterface
  copying ./rpy/rinterface/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface
  creating build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests
  copying ./rpy/rinterface/tests/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests
  copying ./rpy/rinterface/tests/test_Device.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests
  copying ./rpy/rinterface/tests/test_EmbeddedR.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests
  copying ./rpy/rinterface/tests/test_Sexp.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests
  copying ./rpy/rinterface/tests/test_SexpClosure.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests
  copying ./rpy/rinterface/tests/test_SexpEnvironment.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests
  copying ./rpy/rinterface/tests/test_SexpExtPtr.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests
  copying ./rpy/rinterface/tests/test_SexpVector.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests
  copying ./rpy/rinterface/tests/test_SexpVectorNumeric.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests
  creating build/lib.macosx-10.9-intel-2.7/rpy2/robjects
  copying ./rpy/robjects/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects
  copying ./rpy/robjects/constants.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects
  copying ./rpy/robjects/conversion.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects
  copying ./rpy/robjects/environments.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects
  copying ./rpy/robjects/functions.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects
  copying ./rpy/robjects/help.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects
  copying ./rpy/robjects/language.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects
  copying ./rpy/robjects/methods.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects
  copying ./rpy/robjects/numpy2ri.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects
  copying ./rpy/robjects/packages.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects
  copying ./rpy/robjects/pandas2ri.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects
  copying ./rpy/robjects/robject.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects
  copying ./rpy/robjects/vectors.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects
  creating build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests
  copying ./rpy/robjects/tests/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests
  copying ./rpy/robjects/tests/testArray.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests
  copying ./rpy/robjects/tests/testDataFrame.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests
  copying ./rpy/robjects/tests/testEnvironment.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests
  copying ./rpy/robjects/tests/testFormula.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests
  copying ./rpy/robjects/tests/testFunction.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests
  copying ./rpy/robjects/tests/testHelp.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests
  copying ./rpy/robjects/tests/testLanguage.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests
  copying ./rpy/robjects/tests/testMethods.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests
  copying ./rpy/robjects/tests/testNumpyConversions.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests
  copying ./rpy/robjects/tests/testPackages.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests
  copying ./rpy/robjects/tests/testPandasConversions.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests
  copying ./rpy/robjects/tests/testRObject.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests
  copying ./rpy/robjects/tests/testRobjects.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests
  copying ./rpy/robjects/tests/testVector.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests
  creating build/lib.macosx-10.9-intel-2.7/rpy2/robjects/lib
  copying ./rpy/robjects/lib/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/lib
  copying ./rpy/robjects/lib/ggplot2.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/lib
  copying ./rpy/robjects/lib/grid.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/lib
  creating build/lib.macosx-10.9-intel-2.7/rpy2/robjects/lib/tests
  copying ./rpy/robjects/lib/tests/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/lib/tests
  copying ./rpy/robjects/lib/tests/test_ggplot2.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/lib/tests
  creating build/lib.macosx-10.9-intel-2.7/rpy2/interactive
  copying ./rpy/interactive/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/interactive
  copying ./rpy/interactive/ipython.py -> build/lib.macosx-10.9-intel-2.7/rpy2/interactive
  copying ./rpy/interactive/packages.py -> build/lib.macosx-10.9-intel-2.7/rpy2/interactive
  copying ./rpy/interactive/process_revents.py -> build/lib.macosx-10.9-intel-2.7/rpy2/interactive
  creating build/lib.macosx-10.9-intel-2.7/rpy2/interactive/tests
  copying ./rpy/interactive/tests/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/interactive/tests
  running build_ext
  "/opt/local/Library/Frameworks/R.framework/Resources/bin/R" CMD config --ldflags
  "/opt/local/Library/Frameworks/R.framework/Resources/bin/R" CMD config --cppflags
  "/opt/local/Library/Frameworks/R.framework/Resources/bin/R" CMD config LAPACK_LIBS

  returned an empty string.

  "/opt/local/Library/Frameworks/R.framework/Resources/bin/R" CMD config BLAS_LIBS

  returned an empty string.

  Configuration for R as a library:
    include_dirs: ('/opt/local/Library/Frameworks/R.framework/Resources/include',)
    libraries: ()
    library_dirs: ('/opt/local/Library/Frameworks/R.framework/Resources/lib',)
    extra_link_args: ('-F/opt/local/Library/Frameworks/R.framework/..', '-framework R')
   # OSX-specific (included in extra_link_args)
    framework_dirs: ('-F/opt/local/Library/Frameworks/R.framework/..',)
    frameworks: ('-framework R',)
  building 'rpy2.rinterface._rinterface' extension
  creating build/temp.macosx-10.9-intel-2.7
  creating build/temp.macosx-10.9-intel-2.7/rpy
  creating build/temp.macosx-10.9-intel-2.7/rpy/rinterface
  cc -fno-strict-aliasing -fno-common -dynamic -arch x86_64 -arch i386 -g -Os -pipe -fno-common -fno-strict-aliasing -fwrapv -mno-fused-madd -DENABLE_DTRACE -DMACOSX -DNDEBUG -Wall -Wstrict-prototypes -Wshorten-64-to-32 -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -DENABLE_DTRACE -arch x86_64 -arch i386 -pipe -DR_INTERFACE_PTRS=1 -DHAVE_POSIX_SIGJMP=1 -DRIF_HAS_RSIGHAND=1 -DCSTACK_DEFNS=1 -DHAS_READLINE=1 -I./rpy/rinterface -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -I/opt/local/Library/Frameworks/R.framework/Resources/include -c ./rpy/rinterface/_rinterface.c -o build/temp.macosx-10.9-intel-2.7/./rpy/rinterface/_rinterface.o
  clang: error: unknown argument: '-mno-fused-madd' [-Wunused-command-line-argument-hard-error-in-future]
  clang: note: this will be a hard error (cannot be downgraded to a warning) in the future
  error: command 'cc' failed with exit status 1
  Complete output from command /usr/bin/python -c "import setuptools, tokenize;__file__='/private/tmp/pip_build_root/rpy2/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /tmp/pip-E3rnYf-record/install-record.txt --single-version-externally-managed --compile:
  running install

running build

running build_py

creating build

creating build/lib.macosx-10.9-intel-2.7

creating build/lib.macosx-10.9-intel-2.7/rpy2

copying ./rpy/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2

copying ./rpy/rpy_classic.py -> build/lib.macosx-10.9-intel-2.7/rpy2

copying ./rpy/tests.py -> build/lib.macosx-10.9-intel-2.7/rpy2

copying ./rpy/tests_rpy_classic.py -> build/lib.macosx-10.9-intel-2.7/rpy2

creating build/lib.macosx-10.9-intel-2.7/rpy2/rlike

copying ./rpy/rlike/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rlike

copying ./rpy/rlike/container.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rlike

copying ./rpy/rlike/functional.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rlike

copying ./rpy/rlike/indexing.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rlike

creating build/lib.macosx-10.9-intel-2.7/rpy2/rlike/tests

copying ./rpy/rlike/tests/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rlike/tests

copying ./rpy/rlike/tests/test_container.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rlike/tests

copying ./rpy/rlike/tests/test_functional.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rlike/tests

copying ./rpy/rlike/tests/test_indexing.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rlike/tests

creating build/lib.macosx-10.9-intel-2.7/rpy2/rinterface

copying ./rpy/rinterface/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface

creating build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests

copying ./rpy/rinterface/tests/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests

copying ./rpy/rinterface/tests/test_Device.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests

copying ./rpy/rinterface/tests/test_EmbeddedR.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests

copying ./rpy/rinterface/tests/test_Sexp.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests

copying ./rpy/rinterface/tests/test_SexpClosure.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests

copying ./rpy/rinterface/tests/test_SexpEnvironment.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests

copying ./rpy/rinterface/tests/test_SexpExtPtr.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests

copying ./rpy/rinterface/tests/test_SexpVector.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests

copying ./rpy/rinterface/tests/test_SexpVectorNumeric.py -> build/lib.macosx-10.9-intel-2.7/rpy2/rinterface/tests

creating build/lib.macosx-10.9-intel-2.7/rpy2/robjects

copying ./rpy/robjects/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects

copying ./rpy/robjects/constants.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects

copying ./rpy/robjects/conversion.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects

copying ./rpy/robjects/environments.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects

copying ./rpy/robjects/functions.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects

copying ./rpy/robjects/help.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects

copying ./rpy/robjects/language.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects

copying ./rpy/robjects/methods.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects

copying ./rpy/robjects/numpy2ri.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects

copying ./rpy/robjects/packages.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects

copying ./rpy/robjects/pandas2ri.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects

copying ./rpy/robjects/robject.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects

copying ./rpy/robjects/vectors.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects

creating build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests

copying ./rpy/robjects/tests/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests

copying ./rpy/robjects/tests/testArray.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests

copying ./rpy/robjects/tests/testDataFrame.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests

copying ./rpy/robjects/tests/testEnvironment.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests

copying ./rpy/robjects/tests/testFormula.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests

copying ./rpy/robjects/tests/testFunction.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests

copying ./rpy/robjects/tests/testHelp.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests

copying ./rpy/robjects/tests/testLanguage.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests

copying ./rpy/robjects/tests/testMethods.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests

copying ./rpy/robjects/tests/testNumpyConversions.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests

copying ./rpy/robjects/tests/testPackages.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests

copying ./rpy/robjects/tests/testPandasConversions.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests

copying ./rpy/robjects/tests/testRObject.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests

copying ./rpy/robjects/tests/testRobjects.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests

copying ./rpy/robjects/tests/testVector.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/tests

creating build/lib.macosx-10.9-intel-2.7/rpy2/robjects/lib

copying ./rpy/robjects/lib/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/lib

copying ./rpy/robjects/lib/ggplot2.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/lib

copying ./rpy/robjects/lib/grid.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/lib

creating build/lib.macosx-10.9-intel-2.7/rpy2/robjects/lib/tests

copying ./rpy/robjects/lib/tests/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/lib/tests

copying ./rpy/robjects/lib/tests/test_ggplot2.py -> build/lib.macosx-10.9-intel-2.7/rpy2/robjects/lib/tests

creating build/lib.macosx-10.9-intel-2.7/rpy2/interactive

copying ./rpy/interactive/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/interactive

copying ./rpy/interactive/ipython.py -> build/lib.macosx-10.9-intel-2.7/rpy2/interactive

copying ./rpy/interactive/packages.py -> build/lib.macosx-10.9-intel-2.7/rpy2/interactive

copying ./rpy/interactive/process_revents.py -> build/lib.macosx-10.9-intel-2.7/rpy2/interactive

creating build/lib.macosx-10.9-intel-2.7/rpy2/interactive/tests

copying ./rpy/interactive/tests/__init__.py -> build/lib.macosx-10.9-intel-2.7/rpy2/interactive/tests

running build_ext

"/opt/local/Library/Frameworks/R.framework/Resources/bin/R" CMD config --ldflags

"/opt/local/Library/Frameworks/R.framework/Resources/bin/R" CMD config --cppflags

"/opt/local/Library/Frameworks/R.framework/Resources/bin/R" CMD config LAPACK_LIBS



returned an empty string.



"/opt/local/Library/Frameworks/R.framework/Resources/bin/R" CMD config BLAS_LIBS



returned an empty string.



Configuration for R as a library:

  include_dirs: ('/opt/local/Library/Frameworks/R.framework/Resources/include',)

  libraries: ()

  library_dirs: ('/opt/local/Library/Frameworks/R.framework/Resources/lib',)

  extra_link_args: ('-F/opt/local/Library/Frameworks/R.framework/..', '-framework R')

 # OSX-specific (included in extra_link_args)

  framework_dirs: ('-F/opt/local/Library/Frameworks/R.framework/..',)

  frameworks: ('-framework R',)

building 'rpy2.rinterface._rinterface' extension

creating build/temp.macosx-10.9-intel-2.7

creating build/temp.macosx-10.9-intel-2.7/rpy

creating build/temp.macosx-10.9-intel-2.7/rpy/rinterface

cc -fno-strict-aliasing -fno-common -dynamic -arch x86_64 -arch i386 -g -Os -pipe -fno-common -fno-strict-aliasing -fwrapv -mno-fused-madd -DENABLE_DTRACE -DMACOSX -DNDEBUG -Wall -Wstrict-prototypes -Wshorten-64-to-32 -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -DENABLE_DTRACE -arch x86_64 -arch i386 -pipe -DR_INTERFACE_PTRS=1 -DHAVE_POSIX_SIGJMP=1 -DRIF_HAS_RSIGHAND=1 -DCSTACK_DEFNS=1 -DHAS_READLINE=1 -I./rpy/rinterface -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -I/opt/local/Library/Frameworks/R.framework/Resources/include -c ./rpy/rinterface/_rinterface.c -o build/temp.macosx-10.9-intel-2.7/./rpy/rinterface/_rinterface.o

clang: error: unknown argument: '-mno-fused-madd' [-Wunused-command-line-argument-hard-error-in-future]

clang: note: this will be a hard error (cannot be downgraded to a warning) in the future

error: command 'cc' failed with exit status 1

----------------------------------------
Cleaning up...
  Removing temporary dir /private/tmp/pip_build_root...
Command /usr/bin/python -c "import setuptools, tokenize;__file__='/private/tmp/pip_build_root/rpy2/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /tmp/pip-E3rnYf-record/install-record.txt --single-version-externally-managed --compile failed with error code 1 in /private/tmp/pip_build_root/rpy2
Exception information:
Traceback (most recent call last):
  File "/Library/Python/2.7/site-packages/pip-1.5.1-py2.7.egg/pip/basecommand.py", line 122, in main
    status = self.run(options, args)
  File "/Library/Python/2.7/site-packages/pip-1.5.1-py2.7.egg/pip/commands/install.py", line 279, in run
    requirement_set.install(install_options, global_options, root=options.root_path)
  File "/Library/Python/2.7/site-packages/pip-1.5.1-py2.7.egg/pip/req.py", line 1380, in install
    requirement.install(install_options, global_options, *args, **kwargs)
  File "/Library/Python/2.7/site-packages/pip-1.5.1-py2.7.egg/pip/req.py", line 699, in install
    cwd=self.source_dir, filter_stdout=self._filter_install, show_stdout=False)
  File "/Library/Python/2.7/site-packages/pip-1.5.1-py2.7.egg/pip/util.py", line 697, in call_subprocess
    % (command_desc, proc.returncode, cwd))
InstallationError: Command /usr/bin/python -c "import setuptools,     tokenize;__file__='/private/tmp/pip_build_root/rpy2/setup.py';exec(compile(getattr(tokenize, 'open', open)(__file__).read().replace('\r\n', '\n'), __file__, 'exec'))" install --record /tmp/pip-E3rnYf-record/install-record.txt --single-version-externally-managed --compile failed with error code 1 in /private/tmp/pip_build_root/rpy2

【问题讨论】：

  • 嗨@ernestorab，欢迎来到StackOverflow！将来，请尝试像 Bob Gilmore 为您所做的那样格式化大量代码。您可以在此处了解如何格式化问题和答案：stackoverflow.com/help/formatting
  • 谢谢@BobGilmore。以后我会格式化代码。

标签： osx-mavericks rpy2


【解决方案1】：

我遇到了同样的问题，this 为我工作。

在构建 rpy2 之前设置这些环境变量：

export CFLAGS=-Qunused-arguments
export CPPFLAGS=-Qunused-arguments

【讨论】：

    【解决方案2】：

    这与 CC 编译器有关（错误就在 Python 回溯之前）：

    cc -fno-strict-aliasing -fno-common -dynamic -arch x86_64 -arch i386 -g -Os -pipe -fno-common -fno-strict-aliasing -fwrapv -mno-fused-madd -DENABLE_DTRACE -DMACOSX -DNDEBUG -Wall -Wstrict-prototypes -Wshorten-64-to-32 -DNDEBUG -g -fwrapv -Os -Wall -Wstrict-prototypes -DENABLE_DTRACE -arch x86_64 -arch i386 -pipe -DR_INTERFACE_PTRS=1 -DHAVE_POSIX_SIGJMP=1 -DRIF_HAS_RSIGHAND=1 -DCSTACK_DEFNS=1 -DHAS_READLINE=1 -I./rpy/rinterface -I/System/Library/Frameworks/Python.framework/Versions/2.7/include/python2.7 -I/opt/local/Library/Frameworks/R.framework/Resources/include -c ./rpy/rinterface/_rinterface.c -o build/temp.macosx-10.9-intel-2.7/./rpy/rinterface/_rinterface.o

clang: error: unknown argument: '-mno-fused-madd' [-Wunused-command-line-argument-hard-error-in-future]

clang: note: this will be a hard error (cannot be downgraded to a warning) in the future

error: command 'cc' failed with exit status 1

    您能否提供有关 C 编译器（OS X 开发工具？其他地方？）和 Python（自制软件？二进制安装？其他？）的起源的详细信息。您是否使用特定的环境变量（例如CFLAGS，或其他可能被clang 提取的变量）？

    【讨论】：

    • 我安装了最新版本的OS X开发工具，但错误仍然出现，可能我必须重新安装CC编译器。而且我使用的python版本是OS X自带的。我没有使用任何具体的环境变量，我只是在终端上写了sudo pip install rpy2。
    • @ernestorab ：一些标志将来自您使用的 python 的构建方式。在这里，这意味着 XCode 中的 clang 与系统 python 的构建方式不兼容。我没有 OS X 10.9；有人可能可以发表评论。在任何情况下，我都建议不要使用系统的 Python，而是在不同的 Python（homebrew、python.org 等）上安装 3rd 方包
    • 感谢您的推荐。我会试一试，但我想我会用另一台电脑玩一下python。
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